How To Install xtpcpp-tandemwrapper on Ubuntu
Posted on April 1, 2023 (Last modified on May 20, 2023 )
2 minutes • 357 words
Introduction
In this tutorial we learn how to install xtpcpp-tandemwrapper on Ubuntu.
What is xtpcpp-tandemwrapper
xtpcpp-tandemwrapper is:
Allows using transparently the X!Tandem database search engine originally developped at https://www.thegpm.org/TANDEM/ on timsTOF pro raw data or any other standard format not yet handled natively by X!Tandem.
There are three methods to install xtpcpp-tandemwrapper on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install xtpcpp-tandemwrapper Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install xtpcpp-tandemwrapper using apt-get by running the following command:
sudo apt-get -y install xtpcpp-tandemwrapper
Install xtpcpp-tandemwrapper Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install xtpcpp-tandemwrapper using apt by running the following command:
sudo apt -y install xtpcpp-tandemwrapper
Install xtpcpp-tandemwrapper Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install xtpcpp-tandemwrapper using aptitude by running the following command:
sudo aptitude -y install xtpcpp-tandemwrapper
How To Uninstall xtpcpp-tandemwrapper on Ubuntu
To uninstall only the xtpcpp-tandemwrapper package we can use the following command:
sudo apt-get remove xtpcpp-tandemwrapper
Uninstall xtpcpp-tandemwrapper And Its Dependencies
To uninstall xtpcpp-tandemwrapper and its dependencies that are no longer needed by Ubuntu, we can use the command below:
sudo apt-get -y autoremove xtpcpp-tandemwrapper
Remove xtpcpp-tandemwrapper Configurations and Data
To remove xtpcpp-tandemwrapper configuration and data from Ubuntu we can use the following command:
sudo apt-get -y purge xtpcpp-tandemwrapper
Remove xtpcpp-tandemwrapper configuration, data, and all of its dependencies
We can use the following command to remove xtpcpp-tandemwrapper configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge xtpcpp-tandemwrapper
Dependencies
xtpcpp-tandemwrapper have the following dependencies:
References
Summary
In this tutorial we learn how to install xtpcpp-tandemwrapper package on Ubuntu using different package management tools: apt, apt-get and aptitude.