How To Install threeb-imagej on Ubuntu
Posted on April 1, 2023 (Last modified on May 20, 2023 )
2 minutes • 391 words
Introduction
In this tutorial we learn how to install threeb-imagej on Ubuntu.
What is threeb-imagej
threeb-imagej is:
Bayesian analysis of blinking and bleaching, or 3B microscopy, is a method which analyses data in which many overlapping fluorophores undergo bleaching and blinking events, giving the structure at enhanced resolution. By using a Hidden Markov Model (HMM), it allows useful information to be obtained from data that would be impossible to analyse with standard localisation analysis techniques.
This package contains the ImageJ plugin.
There are three methods to install threeb-imagej on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install threeb-imagej Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install threeb-imagej using apt-get by running the following command:
sudo apt-get -y install threeb-imagej
Install threeb-imagej Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install threeb-imagej using apt by running the following command:
sudo apt -y install threeb-imagej
Install threeb-imagej Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install threeb-imagej using aptitude by running the following command:
sudo aptitude -y install threeb-imagej
How To Uninstall threeb-imagej on Ubuntu
To uninstall only the threeb-imagej package we can use the following command:
sudo apt-get remove threeb-imagej
Uninstall threeb-imagej And Its Dependencies
To uninstall threeb-imagej and its dependencies that are no longer needed by Ubuntu, we can use the command below:
sudo apt-get -y autoremove threeb-imagej
Remove threeb-imagej Configurations and Data
To remove threeb-imagej configuration and data from Ubuntu we can use the following command:
sudo apt-get -y purge threeb-imagej
Remove threeb-imagej configuration, data, and all of its dependencies
We can use the following command to remove threeb-imagej configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge threeb-imagej
Dependencies
threeb-imagej have the following dependencies:
References
Summary
In this tutorial we learn how to install threeb-imagej package on Ubuntu using different package management tools: apt, apt-get and aptitude.