How To Install r-cran-wgcna on Ubuntu

Posted on April 1, 2023 (Last modified on May 20, 2023 )

2 minutes • 400 words

Introduction

In this tutorial we learn how to install r-cran-wgcna on Ubuntu.

What is `r-cran-wgcna`

r-cran-wgcna is:

Functions necessary to perform Weighted Correlation Network Analysis on high-dimensional data as originally described in Horvath and Zhang (2005) doi:10.2202/1544-6115.1128 and Langfelder and Horvath (2008) doi:10.1186/1471-2105-9-559. Includes functions for rudimentary data cleaning, construction of correlation networks, module identification, summarization, and relating of variables and modules to sample traits. Also includes a number of utility functions for data manipulation and visualization.

There are three methods to install r-cran-wgcna on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-cran-wgcna Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-cran-wgcna using apt-get by running the following command:

sudo apt-get -y install r-cran-wgcna

Install r-cran-wgcna Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-cran-wgcna using apt by running the following command:

sudo apt -y install r-cran-wgcna

Install r-cran-wgcna Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-cran-wgcna using aptitude by running the following command:

sudo aptitude -y install r-cran-wgcna

How To Uninstall r-cran-wgcna on Ubuntu

To uninstall only the r-cran-wgcna package we can use the following command:

sudo apt-get remove r-cran-wgcna

Uninstall r-cran-wgcna And Its Dependencies

To uninstall r-cran-wgcna and its dependencies that are no longer needed by Ubuntu, we can use the command below:

sudo apt-get -y autoremove r-cran-wgcna

Remove r-cran-wgcna Configurations and Data

To remove r-cran-wgcna configuration and data from Ubuntu we can use the following command:

sudo apt-get -y purge r-cran-wgcna

Remove r-cran-wgcna configuration, data, and all of its dependencies

We can use the following command to remove r-cran-wgcna configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-cran-wgcna

Dependencies

r-cran-wgcna have the following dependencies:

References

r-cran-wgcna website

Summary

In this tutorial we learn how to install r-cran-wgcna package on Ubuntu using different package management tools: apt, apt-get and aptitude.