How To Install r-cran-goplot on Ubuntu
Posted on April 1, 2023 (Last modified on May 20, 2023 )
2 minutes • 412 words
Introduction
In this tutorial we learn how to install r-cran-goplot on Ubuntu.
What is r-cran-goplot
r-cran-goplot is:
Implementation of multilayered visualizations for enhanced graphical representation of functional analysis data. It combines and integrates omics data derived from expression and functional annotation enrichment analyses. Its plotting functions have been developed with an hierarchical structure in mind: starting from a general overview to identify the most enriched categories (modified bar plot, bubble plot) to a more detailed one displaying different types of relevant information for the molecules in a given set of categories (circle plot, chord plot, cluster plot, Venn diagram, heatmap).
There are three methods to install r-cran-goplot on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-cran-goplot Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-cran-goplot using apt-get by running the following command:
sudo apt-get -y install r-cran-goplot
Install r-cran-goplot Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-cran-goplot using apt by running the following command:
sudo apt -y install r-cran-goplot
Install r-cran-goplot Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-cran-goplot using aptitude by running the following command:
sudo aptitude -y install r-cran-goplot
How To Uninstall r-cran-goplot on Ubuntu
To uninstall only the r-cran-goplot package we can use the following command:
sudo apt-get remove r-cran-goplot
Uninstall r-cran-goplot And Its Dependencies
To uninstall r-cran-goplot and its dependencies that are no longer needed by Ubuntu, we can use the command below:
sudo apt-get -y autoremove r-cran-goplot
Remove r-cran-goplot Configurations and Data
To remove r-cran-goplot configuration and data from Ubuntu we can use the following command:
sudo apt-get -y purge r-cran-goplot
Remove r-cran-goplot configuration, data, and all of its dependencies
We can use the following command to remove r-cran-goplot configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-cran-goplot
Dependencies
r-cran-goplot have the following dependencies:
References
Summary
In this tutorial we learn how to install r-cran-goplot package on Ubuntu using different package management tools: apt, apt-get and aptitude.