How To Install r-bioc-zlibbioc on Ubuntu
Posted on April 1, 2023 (Last modified on May 20, 2023 )
2 minutes • 366 words
Introduction
In this tutorial we learn how to install r-bioc-zlibbioc on Ubuntu.
What is r-bioc-zlibbioc
r-bioc-zlibbioc is:
zlibbioc provides the zlib library to the Bioconductor environment. This is useless on Debian because zlib is packaged. So, to avoid to patch all Bioconductor packages which required zlibbioc, zlibbioc is packaged as an empty shell depending on zlib1g-dev.
There are three methods to install r-bioc-zlibbioc on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-zlibbioc Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-zlibbioc using apt-get by running the following command:
sudo apt-get -y install r-bioc-zlibbioc
Install r-bioc-zlibbioc Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-bioc-zlibbioc using apt by running the following command:
sudo apt -y install r-bioc-zlibbioc
Install r-bioc-zlibbioc Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-zlibbioc using aptitude by running the following command:
sudo aptitude -y install r-bioc-zlibbioc
How To Uninstall r-bioc-zlibbioc on Ubuntu
To uninstall only the r-bioc-zlibbioc package we can use the following command:
sudo apt-get remove r-bioc-zlibbioc
Uninstall r-bioc-zlibbioc And Its Dependencies
To uninstall r-bioc-zlibbioc and its dependencies that are no longer needed by Ubuntu, we can use the command below:
sudo apt-get -y autoremove r-bioc-zlibbioc
Remove r-bioc-zlibbioc Configurations and Data
To remove r-bioc-zlibbioc configuration and data from Ubuntu we can use the following command:
sudo apt-get -y purge r-bioc-zlibbioc
Remove r-bioc-zlibbioc configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-zlibbioc configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-zlibbioc
Dependencies
r-bioc-zlibbioc have the following dependencies:
References
Summary
In this tutorial we learn how to install r-bioc-zlibbioc package on Ubuntu using different package management tools: apt, apt-get and aptitude.