How To Install r-bioc-scuttle on Ubuntu

Posted on April 1, 2023 (Last modified on May 20, 2023 )

2 minutes • 369 words

Introduction

In this tutorial we learn how to install r-bioc-scuttle on Ubuntu.

What is `r-bioc-scuttle`

r-bioc-scuttle is:

Provides basic utility functions for performing single-cell analyses, focusing on simple normalization, quality control and data transformations. Also provides some helper functions to assist development of other packages.

There are three methods to install r-bioc-scuttle on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-scuttle Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-scuttle using apt-get by running the following command:

sudo apt-get -y install r-bioc-scuttle

Install r-bioc-scuttle Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-scuttle using apt by running the following command:

sudo apt -y install r-bioc-scuttle

Install r-bioc-scuttle Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-scuttle using aptitude by running the following command:

sudo aptitude -y install r-bioc-scuttle

How To Uninstall r-bioc-scuttle on Ubuntu

To uninstall only the r-bioc-scuttle package we can use the following command:

sudo apt-get remove r-bioc-scuttle

Uninstall r-bioc-scuttle And Its Dependencies

To uninstall r-bioc-scuttle and its dependencies that are no longer needed by Ubuntu, we can use the command below:

sudo apt-get -y autoremove r-bioc-scuttle

Remove r-bioc-scuttle Configurations and Data

To remove r-bioc-scuttle configuration and data from Ubuntu we can use the following command:

sudo apt-get -y purge r-bioc-scuttle

Remove r-bioc-scuttle configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-scuttle configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-scuttle

Dependencies

r-bioc-scuttle have the following dependencies:

References

r-bioc-scuttle website

Summary

In this tutorial we learn how to install r-bioc-scuttle package on Ubuntu using different package management tools: apt, apt-get and aptitude.