How To Install r-bioc-eir on Ubuntu

Posted on April 1, 2023 (Last modified on May 20, 2023 )

2 minutes • 359 words

Introduction

In this tutorial we learn how to install r-bioc-eir on Ubuntu.

What is `r-bioc-eir`

r-bioc-eir is:

The eiR package provides utilities for accelerated structure similarity searching of very large small molecule data sets using an embedding and indexing approach.

There are three methods to install r-bioc-eir on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-eir Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-eir using apt-get by running the following command:

sudo apt-get -y install r-bioc-eir

Install r-bioc-eir Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-eir using apt by running the following command:

sudo apt -y install r-bioc-eir

Install r-bioc-eir Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-eir using aptitude by running the following command:

sudo aptitude -y install r-bioc-eir

How To Uninstall r-bioc-eir on Ubuntu

To uninstall only the r-bioc-eir package we can use the following command:

sudo apt-get remove r-bioc-eir

Uninstall r-bioc-eir And Its Dependencies

To uninstall r-bioc-eir and its dependencies that are no longer needed by Ubuntu, we can use the command below:

sudo apt-get -y autoremove r-bioc-eir

Remove r-bioc-eir Configurations and Data

To remove r-bioc-eir configuration and data from Ubuntu we can use the following command:

sudo apt-get -y purge r-bioc-eir

Remove r-bioc-eir configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-eir configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-eir

Dependencies

r-bioc-eir have the following dependencies:

References

r-bioc-eir website

Summary

In this tutorial we learn how to install r-bioc-eir package on Ubuntu using different package management tools: apt, apt-get and aptitude.