How To Install r-bioc-biocsingular on Ubuntu

Posted on April 1, 2023 (Last modified on May 20, 2023 )

2 minutes • 376 words

Introduction

In this tutorial we learn how to install r-bioc-biocsingular on Ubuntu.

What is `r-bioc-biocsingular`

r-bioc-biocsingular is:

Implements exact and approximate methods for singular value decomposition and principal components analysis, in a framework that allows them to be easily switched within Bioconductor packages or workflows. Where possible, parallelization is achieved using the BiocParallel framework.

There are three methods to install r-bioc-biocsingular on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-biocsingular Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-biocsingular using apt-get by running the following command:

sudo apt-get -y install r-bioc-biocsingular

Install r-bioc-biocsingular Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-biocsingular using apt by running the following command:

sudo apt -y install r-bioc-biocsingular

Install r-bioc-biocsingular Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-biocsingular using aptitude by running the following command:

sudo aptitude -y install r-bioc-biocsingular

How To Uninstall r-bioc-biocsingular on Ubuntu

To uninstall only the r-bioc-biocsingular package we can use the following command:

sudo apt-get remove r-bioc-biocsingular

Uninstall r-bioc-biocsingular And Its Dependencies

To uninstall r-bioc-biocsingular and its dependencies that are no longer needed by Ubuntu, we can use the command below:

sudo apt-get -y autoremove r-bioc-biocsingular

Remove r-bioc-biocsingular Configurations and Data

To remove r-bioc-biocsingular configuration and data from Ubuntu we can use the following command:

sudo apt-get -y purge r-bioc-biocsingular

Remove r-bioc-biocsingular configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-biocsingular configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-biocsingular

Dependencies

r-bioc-biocsingular have the following dependencies:

References

r-bioc-biocsingular website

Summary

In this tutorial we learn how to install r-bioc-biocsingular package on Ubuntu using different package management tools: apt, apt-get and aptitude.