How To Install pullseq on Ubuntu
Posted on April 1, 2023 (Last modified on May 20, 2023 )
2 minutes • 356 words
Introduction
In this tutorial we learn how to install pullseq on Ubuntu.
What is pullseq
pullseq is:
This is a utility to extract sequence from a fasta or fastq. Also helps filter sequences by a minimum length or maximum length. Fast, written in C, using kseq.h library.
There are three methods to install pullseq on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install pullseq Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install pullseq using apt-get by running the following command:
sudo apt-get -y install pullseq
Install pullseq Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install pullseq using apt by running the following command:
sudo apt -y install pullseq
Install pullseq Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install pullseq using aptitude by running the following command:
sudo aptitude -y install pullseq
How To Uninstall pullseq on Ubuntu
To uninstall only the pullseq package we can use the following command:
sudo apt-get remove pullseq
Uninstall pullseq And Its Dependencies
To uninstall pullseq and its dependencies that are no longer needed by Ubuntu, we can use the command below:
sudo apt-get -y autoremove pullseq
Remove pullseq Configurations and Data
To remove pullseq configuration and data from Ubuntu we can use the following command:
sudo apt-get -y purge pullseq
Remove pullseq configuration, data, and all of its dependencies
We can use the following command to remove pullseq configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge pullseq
Dependencies
pullseq have the following dependencies:
References
Summary
In this tutorial we learn how to install pullseq package on Ubuntu using different package management tools: apt, apt-get and aptitude.