How To Install kleborate-examples on Ubuntu
Posted on April 1, 2023 (Last modified on May 20, 2023 )
2 minutes • 400 words
Introduction
In this tutorial we learn how to install kleborate-examples on Ubuntu.
What is kleborate-examples
kleborate-examples is:
Kleborate is a tool to screen Klebsiella genome assemblies for:
- MLST sequence type
- species (e.g. K. pneumoniae, K. quasipneumoniae, K. variicola, etc.)
- ICEKp associated virulence loci: yersiniabactin (ybt), colibactin (clb)
- virulence plasmid associated loci: salmochelin (iro), aerobactin (iuc), hypermucoidy (rmpA, rmpA2)
- antimicrobial resistance genes, including quinolone resistance SNPs and colistin resistance truncations
- K (capsule) and O antigen (LPS) serotype prediction, via wzi alleles and Kaptive
This package provides example data end tests that are used in autopkgtest.
There are three methods to install kleborate-examples on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install kleborate-examples Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install kleborate-examples using apt-get by running the following command:
sudo apt-get -y install kleborate-examples
Install kleborate-examples Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install kleborate-examples using apt by running the following command:
sudo apt -y install kleborate-examples
Install kleborate-examples Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install kleborate-examples using aptitude by running the following command:
sudo aptitude -y install kleborate-examples
How To Uninstall kleborate-examples on Ubuntu
To uninstall only the kleborate-examples package we can use the following command:
sudo apt-get remove kleborate-examples
Uninstall kleborate-examples And Its Dependencies
To uninstall kleborate-examples and its dependencies that are no longer needed by Ubuntu, we can use the command below:
sudo apt-get -y autoremove kleborate-examples
Remove kleborate-examples Configurations and Data
To remove kleborate-examples configuration and data from Ubuntu we can use the following command:
sudo apt-get -y purge kleborate-examples
Remove kleborate-examples configuration, data, and all of its dependencies
We can use the following command to remove kleborate-examples configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge kleborate-examples
Dependencies
kleborate-examples have the following dependencies:
References
Summary
In this tutorial we learn how to install kleborate-examples package on Ubuntu using different package management tools: apt, apt-get and aptitude.