How To Install iitii on Ubuntu
Posted on April 1, 2023 (Last modified on May 20, 2023 )
2 minutes • 377 words
Introduction
In this tutorial we learn how to install iitii on Ubuntu.
What is iitii
iitii is:
Iitii is a data structure for indexing begin/end position intervals, such as genomic feature annotations, and answering requests for all items overlapping a query interval. Building on cgranges by Heng Li, iitii explores ideas from DBMS interpolation search and learned index structures to speed up queries on large datasets.
There are three methods to install iitii on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install iitii Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install iitii using apt-get by running the following command:
sudo apt-get -y install iitii
Install iitii Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install iitii using apt by running the following command:
sudo apt -y install iitii
Install iitii Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install iitii using aptitude by running the following command:
sudo aptitude -y install iitii
How To Uninstall iitii on Ubuntu
To uninstall only the iitii package we can use the following command:
sudo apt-get remove iitii
Uninstall iitii And Its Dependencies
To uninstall iitii and its dependencies that are no longer needed by Ubuntu, we can use the command below:
sudo apt-get -y autoremove iitii
Remove iitii Configurations and Data
To remove iitii configuration and data from Ubuntu we can use the following command:
sudo apt-get -y purge iitii
Remove iitii configuration, data, and all of its dependencies
We can use the following command to remove iitii configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge iitii
Dependencies
iitii have the following dependencies:
References
Summary
In this tutorial we learn how to install iitii package on Ubuntu using different package management tools: apt, apt-get and aptitude.