How To Install genometester on Ubuntu
Posted on April 1, 2023 (Last modified on May 20, 2023 )
2 minutes • 377 words
Introduction
In this tutorial we learn how to install genometester on Ubuntu.
What is genometester
genometester is:
Toolkit for performing set operations - union, intersection and complement - on k-mer lists.
GenomeTester4 toolkit, which contains a novel tool GListCompare for performing union, intersection and complement (difference) set operations on k-mer lists. It contains examples of how these general operations can be combined to solve a variety of biological analysis tasks.
There are three methods to install genometester on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install genometester Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install genometester using apt-get by running the following command:
sudo apt-get -y install genometester
Install genometester Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install genometester using apt by running the following command:
sudo apt -y install genometester
Install genometester Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install genometester using aptitude by running the following command:
sudo aptitude -y install genometester
How To Uninstall genometester on Ubuntu
To uninstall only the genometester package we can use the following command:
sudo apt-get remove genometester
Uninstall genometester And Its Dependencies
To uninstall genometester and its dependencies that are no longer needed by Ubuntu, we can use the command below:
sudo apt-get -y autoremove genometester
Remove genometester Configurations and Data
To remove genometester configuration and data from Ubuntu we can use the following command:
sudo apt-get -y purge genometester
Remove genometester configuration, data, and all of its dependencies
We can use the following command to remove genometester configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge genometester
Dependencies
genometester have the following dependencies:
References
Summary
In this tutorial we learn how to install genometester package on Ubuntu using different package management tools: apt, apt-get and aptitude.