How To Install abacas-examples on Ubuntu
Posted on April 1, 2023 (Last modified on May 20, 2023 )
2 minutes • 376 words
Introduction
In this tutorial we learn how to install abacas-examples on Ubuntu.
What is abacas-examples
abacas-examples is:
ABACAS (Algorithm Based Automatic Contiguation of Assembled Sequences) intends to rapidly contiguate (align, order, orientate), visualize and design primers to close gaps on shotgun assembled contigs based on a reference sequence.
This package contains a test data set as well as sample scripts running some test suite provided by Debian also as autopkgtest.
There are three methods to install abacas-examples on Ubuntu. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install abacas-examples Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install abacas-examples using apt-get by running the following command:
sudo apt-get -y install abacas-examples
Install abacas-examples Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install abacas-examples using apt by running the following command:
sudo apt -y install abacas-examples
Install abacas-examples Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install abacas-examples using aptitude by running the following command:
sudo aptitude -y install abacas-examples
How To Uninstall abacas-examples on Ubuntu
To uninstall only the abacas-examples package we can use the following command:
sudo apt-get remove abacas-examples
Uninstall abacas-examples And Its Dependencies
To uninstall abacas-examples and its dependencies that are no longer needed by Ubuntu, we can use the command below:
sudo apt-get -y autoremove abacas-examples
Remove abacas-examples Configurations and Data
To remove abacas-examples configuration and data from Ubuntu we can use the following command:
sudo apt-get -y purge abacas-examples
Remove abacas-examples configuration, data, and all of its dependencies
We can use the following command to remove abacas-examples configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge abacas-examples
Dependencies
abacas-examples have the following dependencies:
References
Summary
In this tutorial we learn how to install abacas-examples package on Ubuntu using different package management tools: apt, apt-get and aptitude.